BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F11SP1|AL425574
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1754 0.0
>3x_Contig1683
Length = 16378
Score = 1754 bits (861), Expect = 0.0
Identities = 928/974 (95%), Gaps = 2/974 (0%)
Strand = Plus / Minus
Query: 1 gatngattatggtaaagtgaaggtatttttgtgcaaagatctgagtacgatcgtagtaaa 60
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 13256 gatcgattatggtaaagtgcaggtatttttgtgcaaagatctgagtacgatcgtagtaaa 13197
Query: 61 ttattgatmcattgttcgtaatamtttagtgtgagckgtagcatagattctgtmacccct 120
|||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 13196 ttattgatccattgttcgtaatactttagtgtgagctgtagcatagattctgtcacccct 13137
Query: 121 ttctcattgcacattttttmccatgtctcatcattctttccttcagcagaattgaaatta 180
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 13136 ttctcattgcacattttttcccatgtctcatcattctttccttcagcagacttgaaatta 13077
Query: 181 acttgtgttgcaggctgtaatagcttmagtacggttaatatcacatmaggggcagcatat 240
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 13076 acttgtgttgcaggctgtaatagcttcagtacggttaatatcacatcaggggcagcatat 13017
Query: 241 tgaamamatggaaggtmmaatggctgtatmggaamctctcmttctgagggccaggcatma 300
|||| | ||||||||| ||||||||||| |||| ||||| ||||||||||||||||| |
Sbjct: 13016 tgaacacatggaaggtccaatggctgtatcggaacctctccttctgagggccaggcatca 12957
Query: 301 acgtmgaagtmatcgctmaaaggctgaamattattagtatmttgawmtgctcagttcaag 360
|||| ||||| |||||| |||||||||| ||||||||||| |||| ||||| |||||||
Sbjct: 12956 acgtcgaagtcatcgctcaaaggctgaacattattagtatcttgatctgctc-gttcaag 12898
Query: 361 aaaatmaatattgttggatttcgtcamagcgttactacttataaaatmmaagggatcaaa 420
||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 12897 aaaatcaatattgttggatttcgtcacagcgttactacttataaaatccaagggatcaaa 12838
Query: 421 mgagtaagcmatmacggcagtttgtacccgatgttttctgctttatmagggtccgattca 480
|||| ||| || ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12837 cgagtcagccatcacggcagtttgtacccgatgttttctgctttatcagggtccgattca 12778
Query: 481 tctcttgagccatccatgtgaaaaatmattmacttgaatcgaatatgataatdttmacca 540
||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||||
Sbjct: 12777 tctcttgagccatccatgtgacaaatcattcacttgaatcgaatatgataattttcacca 12718
Query: 541 aamattgaaaatmatacacatgagaaatagtccaataaatacgatatgacaatgtatata 600
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12717 aacattgaaaatcatacacatgagaaatagtccaataaatacgatatgacaatgtatata 12658
Query: 601 amatatatatacattggttctataaaamcgacacagatcgtataaactgtgttaatgcac 660
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 12657 acatatatatacattggttctataaaaccgacacagatcgtataaactgtgttaatgcac 12598
Query: 661 ctaaagctgctccagaatgaatactcttttcagcagcatctacacctagtttccagtctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12597 ctaaagctgctccagaatgaatactcttttcagcagcatctacacctagtttccagtctt 12538
Query: 721 ttgtaccacgactcaaacagtacaacaaagctgtatttagcaaaatatagtcgtagatcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12537 ttgtaccacgactcaaacagtacaacaaagctgtatttagcaaaatatagtcgtagatcg 12478
Query: 781 ggttttcacctttcttgtaattgcctgacagtatttcttcagatagtatccttgcattct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12477 ggttttcacctttcttgtaattgcctgacagtatttcttcagatagtatccttgcattct 12418
Query: 841 cgcgagggcccaacgatgggcattctgcaagagtatgctcttgtaaamcgaaatctgacg 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12417 cgcgagggcccaacgatgggcattctgcaagagtatgctcttgtaaaccgaaatctgacg 12358
Query: 901 ggtttatagagaatgattcgacggtaccattcaaggtcacatgccaaacaatagtgtt-c 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12357 ggtttatagagaatgattcgacggtaccattcaaggtcacatgccaaacaatagtgttcc 12298
Query: 960 ctacaggtgatact 973
||||||||||||||
Sbjct: 12297 ctacaggtgatact 12284
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4686
Number of Sequences: 1807
Number of extensions: 4686
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.3 bits)